Sacu_v1.1_s0095.g019231


Description : not classified & original description: CDS=15-2900


Gene families : OG0004380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0095.g019231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248170 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00029p00231350 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G23740 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT3G56870 No alias unknown protein; Has 204 Blast hits to 201 proteins in... 0.05 OrthoFinder output from all 47 species
Als_g01163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G010200.1 Ceric.07G010200 not classified & original description: pacid=50627972... 0.1 OrthoFinder output from all 47 species
Dcu_g18998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009690001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01031579001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_19139 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Gb_25851 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g16322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_124485g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_45158g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g04690.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Sam_g11841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g080200.4.1 Solyc04g080200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g092510.3.1 Solyc09g092510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e002120_P003 Zm00001e002120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017187_P001 Zm00001e017187 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e025613_P002 Zm00001e025613 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e039147_P001 Zm00001e039147 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003876 AMP deaminase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!