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  5. Sacu_v1.1_s0093.g019085

Sacu_v1.1_s0093.g019085


Description : not classified & original description: CDS=1-525


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0093.g019085
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G66240 ATX1, ATATX1 homolog of anti-oxidant 1 0.03 OrthoFinder output from all 47 species
Adi_g008247 CCH copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035579 No alias not classified & original description: CDS=1-639 0.03 OrthoFinder output from all 47 species
Cba_g36396 CCH copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28554 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029113_P001 HIPP20, Zm00001e029113 Heavy metal-associated isoprenylated plant protein 20... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 6 59
No external refs found!