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  5. Sacu_v1.1_s0092.g018967

Sacu_v1.1_s0092.g018967 (ATMYC2, MYC2,...)


Aliases : ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1

Description : bHLH-type transcription factor & original description: CDS=19-2034


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0092.g018967

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00242790 MYC6.2, GL3,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G41315 MYC6.2, GL3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018534 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106050 AIB, ATAIB bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15859 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14626 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g37617 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29710 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05305.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06699.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11475.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22992.t1 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014776 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2304 0.01 OrthoFinder output from all 47 species
Cba_g02690 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g01751 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31249 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_10001 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g50940.1 AIB, ATAIB,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47040.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g11020.1 BHLH42, TT8,... Basic helix-loop-helix protein A OS=Pisum sativum... 0.04 OrthoFinder output from all 47 species
Mp2g05070.1 BHLH42, TT8 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g07889 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g14047 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14087 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14442 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42483 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42150 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g096050.4.1 Solyc01g096050 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc01g096370.4.1 Solyc01g096370 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc05g050560.1.1 Solyc05g050560 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc09g065100.3.1 BHLH42, TT8,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g07612 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12906 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037785_P002 ATMYC2, MYC2,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 107 147
IPR011598 bHLH_dom 441 486
IPR025610 MYC/MYB_N 67 257
No external refs found!