1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0092.g018952

Sacu_v1.1_s0092.g018952 (ABCC1, ATABCC1, MRP1,...)


Aliases : ABCC1, ATABCC1, MRP1, EST1, ATMRP1

Description : subfamily ABCC transporter & original description: CDS=3252-4655


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0092.g018952

Target Alias Description ECC score Gene Family Method Actions
AT1G30400 ABCC1, ATABCC1,... multidrug resistance-associated protein 1 0.02 OrthoFinder output from all 47 species
Adi_g108727 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13122.t1 MRP11, ABCC13,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60420.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66471.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013359 ATABCC5, MRP5,... subfamily ABCC transporter & original description: CDS=377-4993 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.2 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.3 ATMRP8, MRP8, ABCC6 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001024.2 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001729.6 ABCC1, ATABCC1,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.4 ATMRP12, MRP12, ABCC11 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre17.g734612 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g20132 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019471001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01021595001 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Len_g24237 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54959 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_138036g0010 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_635466g0010 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g13860.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Nbi_g03844 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05481 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24428 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32956 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37214 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56076 AtABCC2, ABCC2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.04 OrthoFinder output from all 47 species
Sam_g08938 No alias glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo267271 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc08g006880.3.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 106 249
IPR011527 ABC1_TM_dom 4 146
IPR003439 ABC_transporter-like_ATP-bd 217 367
IPR003439 ABC_transporter-like_ATP-bd 229 364
IPR011527 ABC1_TM_dom 2 113
IPR011527 ABC1_TM_dom 505 610
No external refs found!