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  5. Sacu_v1.1_s0091.g018845

Sacu_v1.1_s0091.g018845 (NDH-O)


Aliases : NDH-O

Description : assembly factor involved in RuBisCo assembly *(RbcX) & original description: CDS=26-484


Gene families : OG0008903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0091.g018845

Target Alias Description ECC score Gene Family Method Actions
AT1G74880 NDH-O NAD(P)H:plastoquinone dehydrogenase complex subunit O 0.04 OrthoFinder output from all 47 species
Ala_g10682 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Als_g02747 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Aop_g06458 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19724.t1 NDH-O, Aspi01Gene19724 component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000804 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Cba_g21960 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Dac_g00125 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10142 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Dde_g00121 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01026485001 NDH-O Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72950.1 NDH-O, LOC_Os01g72950 component NdhO of NDH subcomplex A 0.02 OrthoFinder output from all 47 species
Len_g10034 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Lfl_g16986 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Mp4g21490.1 NDH-O component NdhO of NDH subcomplex A 0.02 OrthoFinder output from all 47 species
Msp_g02956 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00196 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ore_g26404 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ppi_g52142 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Sam_g39407 No alias component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Solyc11g006020.2.1 NDH-O, Solyc11g006020 component NdhO of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Spa_g10342 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Tin_g45495 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Zm00001e028287_P002 NDH-O, Zm00001e028287 component NdhO of NDH subcomplex A 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA Interproscan
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
MF GO:0044183 protein folding chaperone IEA Interproscan
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003435 Chaperonin_RcbX 99 149
IPR020905 NdhO 69 143
No external refs found!