Sacu_v1.1_s0091.g018792 (SAR1, ATSAR1B,...)

Aliases : SAR1, ATSAR1B, ATSAR1, SAR1B, ATSARA1B

Description : small GTPase *(Sar1) & original description: CDS=186-767

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0091.g018792

Target	Alias	Description	ECC score	Gene Family Method
Adi_g042572	SAR1, ATSAR1B,...	small GTPase *(Sar1) & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g078481	SAR1, ATSAR1B,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g03380	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.31G032100.1	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description:...	0.03	OrthoFinder output from all 47 species
Cre11.g468300	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder output from all 47 species
Nbi_g08052	No alias	small GTPase *(Sar1) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g10798	No alias	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g08264	No alias	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g40971	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	8	192

External Links

No external refs found!