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  5. Sacu_v1.1_s0091.g018778

Sacu_v1.1_s0091.g018778


Description : plastidial RNA splicing factor *(cPTH)) & original description: CDS=18-839


Gene families : OG0001693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0091.g018778
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Adi_g064054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35924 No alias plastidial RNA splicing factor *(cPTH)) & original... 0.03 OrthoFinder output from all 47 species
Tin_g45794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 75 254
No external refs found!