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  5. Sacu_v1.1_s0091.g018762

Sacu_v1.1_s0091.g018762 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : component *(MSI1) of PRC2 histone methylation complex & original description: CDS=227-1495


Gene families : OG0001615 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0091.g018762

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00161430 MSI1, MEE70,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Ala_g04419 MSI1, MEE70, ATMSI1 component *(MSI1) of PRC2 histone methylation complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43890.1 MSI1, MEE70,... component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 19 88
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 308 346
IPR001680 WD40_repeat 264 302
No external refs found!