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  5. Sacu_v1.1_s0088.g018602

Sacu_v1.1_s0088.g018602 (ATPRMT11, ATPRMT1B,...)


Aliases : ATPRMT11, ATPRMT1B, PRMT11, PRMT1B

Description : histone methylase *(PRMT1) & original description: CDS=1-1554


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0088.g018602
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT2G19670 PRMT1A, ATPRMT1A protein arginine methyltransferase 1A 0.03 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.04 OrthoFinder output from all 47 species
Cba_g15183 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.04 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.05 OrthoFinder output from all 47 species
Dde_g04778 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58060.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34740.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.2... 0.04 OrthoFinder output from all 47 species
MA_4448g0020 ATPRMT11,... Probable protein arginine N-methyltransferase 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.02 OrthoFinder output from all 47 species
Sam_g26734 No alias ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.04 OrthoFinder output from all 47 species
Zm00001e041934_P002 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!