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  5. Sacu_v1.1_s0088.g018592

Sacu_v1.1_s0088.g018592


Description : regulatory protein *(UBA1/2) of UBP1 activity & original description: CDS=167-1402


Gene families : OG0000537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0088.g018592

Target Alias Description ECC score Gene Family Method Actions
AT3G15010 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Dac_g38121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10422 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
MA_287080g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g22090.1 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0097354 prenylation IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 125 191
IPR000504 RRM_dom 216 283
No external refs found!