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  5. Sacu_v1.1_s0088.g018542

Sacu_v1.1_s0088.g018542 (TOM2A)


Aliases : TOM2A

Description : not classified & original description: CDS=285-1187


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0088.g018542

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00189290 TOM2A,... External stimuli response.biotic stress.tobamovirus... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00039360 TOM2A,... External stimuli response.biotic stress.tobamovirus... 0.02 OrthoFinder output from all 47 species
Als_g26101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01041 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57338.t1 TOM2A, Aspi01Gene57338 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03697 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38410 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29682 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02227 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06603 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013236001 TOM2A External stimuli response.biotic stress.tobamovirus... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06250.1 TOM2A, LOC_Os08g06250 Tobamovirus multiplication protein 2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g18044.2 TOM2A, LOC_Os08g18044 TOM2A tobamovirus multiplication replication host factor 0.03 OrthoFinder output from all 47 species
MA_39757g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04736 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13452 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16652 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23989 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07361 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05104 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g077220.3.1 TOM2A, Solyc08g077220 TOM2A tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species
Spa_g07255 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11017 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11018 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006517_P001 Zm00001e006517 Tetraspanin-19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!