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  5. Sacu_v1.1_s0087.g018517

Sacu_v1.1_s0087.g018517


Description : not classified & original description: CDS=1110-2285


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0087.g018517

Target Alias Description ECC score Gene Family Method Actions
AT3G12920 No alias SBP (S-ribonuclease binding protein) family protein 0.03 OrthoFinder output from all 47 species
Adi_g018161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62396.t1 SBP1, Aspi01Gene62396 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0099.g044160 No alias not classified & original description: CDS=454-1641 0.03 OrthoFinder output from all 47 species
GSVIVT01020407001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 OrthoFinder output from all 47 species
Gb_07205 SBP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g46570.1 LOC_Os03g46570 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!