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  5. Sacu_v1.1_s0086.g018421

Sacu_v1.1_s0086.g018421


Description : storage vacuole protein sorting receptor *(RMR) & original description: CDS=268-1539


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0086.g018421

Target Alias Description ECC score Gene Family Method Actions
Cba_g46007 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Nbi_g42888 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Pir_g60206 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Solyc11g019930.2.1 Solyc11g019930 vacuolar sorting receptor (RMR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 231 275
IPR003137 PA_domain 83 144
No external refs found!