- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: CDS=1-2268
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00266560 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00046p00214930 | CRR22,... | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00210350 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00184210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00018120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022140 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g096701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07100 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54960 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g31088 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008305 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: CDS=82-2724 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009536 | No alias | not classified & original description: CDS=1-2379 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024817 | No alias | not classified & original description: CDS=20-3643 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0046.g030178 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=82-2832 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048869 | No alias | not classified & original description: CDS=1-2157 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06759 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07718 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19293 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34636 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g68945 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G041400.1 | Ceric.01G041400 | not classified & original description: pacid=50592429... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G036800.1 | Ceric.04G036800 | not classified & original description: pacid=50632550... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G046000.1 | CRR22, Ceric.10G046000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G076700.1 | OTP84, Ceric.23G076700 | not classified & original description: pacid=50610256... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G018200.1 | Ceric.27G018200 | not classified & original description: pacid=50604999... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18719 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07600 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21688 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012201001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15183 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26526 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g02780 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23563 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g33777 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431227g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20622g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_381817g0020 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_4438g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_94165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04075 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19065 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06482 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g49012 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53366 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16542 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g26489 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g064750.2.1 | Solyc04g064750 | RNA editing factor (MEF12). serine carboxypeptidase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45537 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 362 | 386 |
| IPR002885 | Pentatricopeptide_repeat | 566 | 590 |
| IPR002885 | Pentatricopeptide_repeat | 57 | 80 |
| IPR002885 | Pentatricopeptide_repeat | 666 | 693 |
| IPR002885 | Pentatricopeptide_repeat | 159 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 286 | 333 |
| IPR002885 | Pentatricopeptide_repeat | 83 | 129 |
| IPR002885 | Pentatricopeptide_repeat | 387 | 435 |
| IPR002885 | Pentatricopeptide_repeat | 185 | 231 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 639 |
| IPR002885 | Pentatricopeptide_repeat | 489 | 536 |
| No external refs found! |