Sacu_v1.1_s0085.g018356


Description : C2H2 subclass Di19 transcription factor & original description: CDS=1-1050


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0085.g018356
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00143100 evm_27.TU.AmTr_v1... Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Adi_g011337 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g04787 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g36560 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G035000.1 Ceric.12G035000 C2H2 subclass Di19 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g18120 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03497 No alias C2H2 subclass Di19 transcription factor & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01028066001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g48190.1 DI19, ATDI19,... Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g06443 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g02157 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12257 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020822 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR027935 Di19_C 235 340
IPR008598 Di19_Zn-bd 145 197
No external refs found!