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  5. Sacu_v1.1_s0085.g018319

Sacu_v1.1_s0085.g018319


Description : not classified & original description: CDS=791-1699


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0085.g018319
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00158800 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G23220 No alias Dynein light chain type 1 family protein 0.04 OrthoFinder output from all 47 species
Ceric.10G015600.1 Ceric.10G015600 light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Ceric.30G037700.1 Ceric.30G037700 not classified & original description: pacid=50607983... 0.01 OrthoFinder output from all 47 species
Ehy_g22084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015506001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01018666001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g37490.1 LOC_Os01g37490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g55510.1 LOC_Os01g55510 Dynein 8 kDa light chain, flagellar outer arm... 0.02 OrthoFinder output from all 47 species
Pnu_g03066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014936_P001 Zm00001e014936 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 211 295
No external refs found!