Sacu_v1.1_s0084.g018279 (NAF1, ATNAF1)

Aliases : NAF1, ATNAF1

Description : non-core component *(NAF1) of H/ACA snoRNP RNA pseudouridylation complex & original description: CDS=193-3531

Gene families : OG0004285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004285_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0084.g018279
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00263450	NAF1, ATNAF1,...	RNA processing.RNA modification.pseudouridylation.H/ACA...	0.04	OrthoFinder output from all 47 species
Ala_g25470	NAF1, ATNAF1	non-core component *(NAF1) of H/ACA snoRNP RNA...	0.04	OrthoFinder output from all 47 species
Aob_g37338	NAF1, ATNAF1	non-core component *(NAF1) of H/ACA snoRNP RNA...	0.03	OrthoFinder output from all 47 species
MA_10092337g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g36447	NAF1, ATNAF1	non-core component *(NAF1) of H/ACA snoRNP RNA...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007504	H/ACA_rnp_Gar1/Naf1	593	676

External Links

No external refs found!