Aliases : RPN5B
Description : regulatory component *(RPN5) of 26S proteasome & original description: CDS=1-1554
Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0083.g018154 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G09900 | EMB2107, MSA, RPN5A | 26S proteasome regulatory subunit, putative (RPN5) | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021348.57 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.01 | OrthoFinder output from all 47 species | |
Cre14.g632775 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g28889 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
MA_10435598g0010 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
Mp6g06620.1 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g08616 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g17093 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g37416 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g00574 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g12287 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
No external refs found! |