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  5. Sacu_v1.1_s0080.g017898

Sacu_v1.1_s0080.g017898


Description : not classified & original description: CDS=1-576


Gene families : OG0007552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0080.g017898

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236310 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G57345 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 OrthoFinder output from all 47 species
Adi_g001525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10793 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26113 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g01070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24867 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g04917 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g00339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g47970.1 LOC_Os06g47970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9214342g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11260 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g09661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013119_P001 Zm00001e013119 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!