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  5. Sacu_v1.1_s0080.g017880

Sacu_v1.1_s0080.g017880


Description : not classified & original description: CDS=1-1959


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0080.g017880
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250660 OTP84,... Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT5G61400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102645 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27232 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.04 OrthoFinder output from all 47 species
Azfi_s0039.g026466 No alias not classified & original description: CDS=1-2883 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030528 No alias not classified & original description: CDS=1-3795 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g033972 OTP84 not classified & original description: CDS=1-2028 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.03 OrthoFinder output from all 47 species
Azfi_s0079.g038406 OTP86 not classified & original description: CDS=1-2394 0.04 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.05 OrthoFinder output from all 47 species
Azfi_s0128.g048778 No alias not classified & original description: CDS=1-2676 0.04 OrthoFinder output from all 47 species
Azfi_s0405.g068372 No alias not classified & original description: CDS=1-2844 0.05 OrthoFinder output from all 47 species
Azfi_s1423.g102903 No alias not classified & original description: CDS=1-2439 0.04 OrthoFinder output from all 47 species
Cba_g06563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07466 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67233 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G031300.1 Ceric.01G031300 not classified & original description: pacid=50591599... 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.20G079700.1 DOT4, Ceric.20G079700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.03 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.05 OrthoFinder output from all 47 species
Ceric.33G057300.1 Ceric.33G057300 not classified & original description: pacid=50607177... 0.03 OrthoFinder output from all 47 species
Ceric.39G004000.1 EMB2758, Ceric.39G004000 not classified & original description: pacid=50582620... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g08183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54328 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g12669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.04 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13838 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo123298 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Solyc07g008890.3.1 Solyc07g008890 Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 317 353
IPR002885 Pentatricopeptide_repeat 418 465
IPR002885 Pentatricopeptide_repeat 520 567
IPR002885 Pentatricopeptide_repeat 393 414
IPR002885 Pentatricopeptide_repeat 121 148
IPR002885 Pentatricopeptide_repeat 191 211
IPR002885 Pentatricopeptide_repeat 221 246
IPR002885 Pentatricopeptide_repeat 92 118
IPR002885 Pentatricopeptide_repeat 495 518
IPR002885 Pentatricopeptide_repeat 594 618
No external refs found!