Sacu_v1.1_s0079.g017761


Description : not classified & original description: CDS=318-3770


Gene families : OG0004492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004492_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0079.g017761
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00232940 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G16210 No alias HEAT repeat-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g089336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51614.t1 Aspi01Gene51614 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g205137 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_24367 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g35911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_21850V3.1 Pp3c18_21850 HEAT repeat-containing protein 0.01 OrthoFinder output from all 47 species
Ppi_g17442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026351_P001 Zm00001e026351 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!