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  5. Sacu_v1.1_s0075.g017441

Sacu_v1.1_s0075.g017441


Description : actin cytoskeleton connecting factor *(SINE) & original description: CDS=1-3633


Gene families : OG0008627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0075.g017441

Target Alias Description ECC score Gene Family Method Actions
Adi_g058870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_538056g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Tin_g21416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 44 81
No external refs found!