- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RGA2, GAI
Description : GRAS-type transcription factor & original description: CDS=1-1875
Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0075.g017422 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00270570 | RGL2,... | External stimuli response.biotic... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00122p00135250 | RGA, RGA1,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G14920 | RGA2, GAI | GRAS family transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G01570 | RGA, RGA1 | GRAS family transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059861 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082189 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02589 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35537 | RGL2 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26688 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01272.t1 | RGA, RGA1,... | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12896.t1 | SCR, SGR1,... | GRAS-type transcription factor *(RAD1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene45973.t1 | RGL1, RGL,... | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene68508.t1 | RGA2, GAI,... | transcription factor *(DELLA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029812 | RGL2 | GRAS-type transcription factor & original description: CDS=1-2046 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036465 | RGA2, GAI | GRAS-type transcription factor & original description: CDS=1-2091 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0460.g072066 | RGA2, GAI | GRAS-type transcription factor & original description: CDS=1-2034 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g20248 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G058000.1 | RGA2, GAI,... | transcription factor *(DELLA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09377 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22196 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07760 | RGL2 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14093 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007532001 | RGA2, GAI | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011710001 | RGA, RGA1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01030735001 | RGL1, RGL | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32252 | RGA, RGA1 | DELLA-type gibberellin signal transducer. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g49990.1 | RGA2, GAI, LOC_Os03g49990 | DELLA-type gibberellin signal transducer. transcription... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g31100.1 | RGL1, RGL, LOC_Os11g31100 | DELLA-type gibberellin signal transducer. transcription... | 0.04 | OrthoFinder output from all 47 species | |
| MA_1417572g0010 | RGA, RGA1 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g20660.1 | RGA2, GAI | DELLA-type gibberellin signal transducer. transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15492 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38765 | SCR, SGR1 | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03173 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g03910 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26688 | RGA, RGA1 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28807 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29064 | SCR, SGR1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30664 | RGL1, RGL | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002822 | RGA, RGA1 | transcription factor *(DELLA) & original description: CDS=1-2391 | 0.03 | OrthoFinder output from all 47 species | |
| Smo83811 | RGA, RGA1 | External stimuli response.biotic... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086370.1.1 | RGA, RGA1, Solyc10g086370 | DELLA-type gibberellin signal transducer. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g011260.1.1 | RGA2, GAI, Solyc11g011260 | DELLA-type gibberellin signal transducer. transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g01866 | RGA2, GAI | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10401 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g13334 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g40110 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020330_P001 | RGA2, GAI, Zm00001e020330 | DELLA-type gibberellin signal transducer. transcription... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| No external refs found! |