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  5. Sacu_v1.1_s0075.g017381

Sacu_v1.1_s0075.g017381


Description : substrate adaptor of SCF E3 ubiquitin ligase *(EID1) & original description: CDS=243-737


Gene families : OG0008245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0075.g017381
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT1G75690 No alias DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g049783 No alias protein disulfide isomerase *(LQY1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09493 No alias protein disulfide isomerase *(LQY1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09596 No alias protein disulfide isomerase *(LQY1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029766 No alias not classified & original description: CDS=236-571 0.03 OrthoFinder output from all 47 species
Ceric.24G006400.1 Ceric.24G006400 protein disulfide isomerase *(LQY1) & original... 0.06 OrthoFinder output from all 47 species
Gb_21368 No alias LQY1 protein involved in PS-II assembly. protein... 0.05 OrthoFinder output from all 47 species
LOC_Os03g14040.1 LOC_Os03g14040 LQY1 protein involved in PS-II assembly. protein... 0.05 OrthoFinder output from all 47 species
Len_g05040 No alias protein disulfide isomerase *(LQY1) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g00235 No alias protein disulfide isomerase *(LQY1) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04500.1 No alias LQY1 protein involved in PS-II assembly. protein... 0.07 OrthoFinder output from all 47 species
Sam_g38639 No alias protein disulfide isomerase *(LQY1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g081320.4.1 Solyc04g081320 LQY1 protein involved in PS-II assembly. protein... 0.05 OrthoFinder output from all 47 species
Spa_g44276 No alias protein disulfide isomerase *(LQY1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007932_P001 Zm00001e007932 LQY1 protein involved in PS-II assembly. protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 51
IPR035272 DUF5351 108 139
No external refs found!