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  5. Sacu_v1.1_s0074.g017227

Sacu_v1.1_s0074.g017227


Description : RopGEF guanine nucleotide exchange factor *(SWAP70) & original description: CDS=266-1606


Gene families : OG0002746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0074.g017227

Target Alias Description ECC score Gene Family Method Actions
Adi_g042069 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.03 OrthoFinder output from all 47 species
Aev_g18530 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020835001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
MA_37385g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011530_P001 Zm00001e011530 RopGEF guanine nucleotide exchange factor (SWAP70) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!