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  5. Sacu_v1.1_s0074.g017203

Sacu_v1.1_s0074.g017203


Description : not classified & original description: CDS=117-584


Gene families : OG0001593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0074.g017203
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G23180 No alias HR-like lesion-inducing protein-related 0.03 OrthoFinder output from all 47 species
Adi_g078293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g101990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0048.g030478 No alias not classified & original description: CDS=147-653 0.03 OrthoFinder output from all 47 species
Msp_g02284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR008637 HR_lesion 1 136
No external refs found!