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  5. Sacu_v1.1_s0073.g017149

Sacu_v1.1_s0073.g017149


Description : not classified & original description: CDS=63-4370


Gene families : OG0005770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0073.g017149

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g10390.1 LOC_Os07g10390 DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g02452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR018846 Cleavage/polyA-sp_fac_asu_N 120 694
IPR004871 Cleavage/polyA-sp_fac_asu_C 1122 1384
No external refs found!