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  5. Sacu_v1.1_s0072.g016933

Sacu_v1.1_s0072.g016933 (emb2737, EMB64)


Aliases : emb2737, EMB64

Description : not classified & original description: CDS=280-1677


Gene families : OG0008639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0072.g016933

Target Alias Description ECC score Gene Family Method Actions
AT5G53860 emb2737, EMB64 embryo defective 2737 0.06 OrthoFinder output from all 47 species
Dcu_g01312 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14757 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01767 emb2737, EMB64 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05374 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05260 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11755 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39929 emb2737, EMB64 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!