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  5. Sacu_v1.1_s0071.g016888

Sacu_v1.1_s0071.g016888 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: CDS=1-969


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0071.g016888

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene65607.t1 ZFN1, Aspi01Gene65607 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dcu_g13224 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Lfl_g01688 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g15918 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g22509 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32665 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Sam_g17138 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 10 35
IPR000571 Znf_CCCH 196 221
IPR000571 Znf_CCCH 242 267
No external refs found!