Cpa|evm.model.tig00021720.14


Description : 35.2 not assigned.unknown Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes. chloroplast RNA binding (CRB)


Gene families : OG_01_0001932 (Gene family) Phylogenetic Tree(s): OG0001932_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021720.14
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G09340 CRB, HIP1.3, CSP41B chloroplast RNA binding 0.05 Gene family
AT3G63140 CSP41A chloroplast stem-loop binding protein of 41 kDa 0.05 Gene family
Cre10.g440050 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
GSVIVT01011082001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
GSVIVT01031272001 No alias 35.2 not assigned.unknown Encodes CHLOROPLAST RNA... 0.03 Gene family
LOC_Os07g11110 Os07g0212200 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
LOC_Os12g23180 Os12g0420200 35.2 not assigned.unknown Encodes CHLOROPLAST RNA... 0.04 Gene family
MA_196108g0010 No alias 35.2 not assigned.unknown Encodes CHLOROPLAST RNA... 0.02 Gene family
MA_307070g0010 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
Smo107618 PACid_15422089 No description available 0.05 Gene family
Smo133157 PACid_15405998 27.3.99 RNA.regulation of transcription.unclassified... 0.01 Gene family
Smo185868 PACid_15408563 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
Smo228849 PACid_15410822 No description available 0.02 Gene family
Solyc06g073260.3.1 Solyc06g073260.3 35.2 not assigned.unknown Encodes CHLOROPLAST RNA... 0.05 Gene family
Solyc09g065180.3.1 Solyc09g065180.3 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family
Zm00001d019177 GRMZM2G111216 27.3.99 RNA.regulation of transcription.unclassified... 0.01 Gene family
Zm00001d035212 GRMZM2G080546,... 35.2 not assigned.unknown Encodes CHLOROPLAST RNA... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan
MF GO:0050662 coenzyme binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 43 257
No external refs found!