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  5. Sacu_v1.1_s0070.g016734

Sacu_v1.1_s0070.g016734 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: CDS=1-918


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0070.g016734

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00039700 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.06 OrthoFinder output from all 47 species
AMTR_s00103p00119740 SYP111,... Vesicle trafficking.SNARE target membrane recognition... 0.06 OrthoFinder output from all 47 species
AT1G08560 SYP111, ATSYP111, KN syntaxin of plants 111 0.04 OrthoFinder output from all 47 species
Adi_g016133 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g01106 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35684.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72617.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034575 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.17G026900.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Dcu_g14231 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dcu_g51782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
GSVIVT01035559001 SYP111, ATSYP111, KN Vesicle trafficking.SNARE target membrane recognition... 0.06 OrthoFinder output from all 47 species
LOC_Os03g52650.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
Len_g49180 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Lfl_g23596 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
MA_99482g0010 ATSYP124, SYP124 SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Msp_g11528 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Nbi_g04089 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Ore_g01296 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pnu_g12258 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ppi_g20351 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ppi_g63426 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc06g053760.3.1 SYP111,... Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.06 OrthoFinder output from all 47 species
Spa_g06782 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g11166 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 41 242
IPR000727 T_SNARE_dom 245 295
No external refs found!