Sacu_v1.1_s0070.g016674

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: CDS=69-2978

Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0070.g016674

Target	Alias	Description	ECC score	Gene Family Method
Als_g32229	RIF10, PNP	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g17083	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.25G023900.1	Ceric.25G023900	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g14765	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
LOC_Os02g40460.1	LOC_Os02g40460	polynucleotide phosphorylase (PNP)	0.04	OrthoFinder output from all 47 species
LOC_Os07g07310.1	RIF10, PNP,...	polynucleotide phosphorylase (PNP)	0.02	OrthoFinder output from all 47 species
Len_g45300	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Msp_g14489	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g09102	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Tin_g20770	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
MF	GO:0043138	3'-5' DNA helicase activity	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001247	ExoRNase_PH_dom1	64	192
IPR001247	ExoRNase_PH_dom1	373	506
IPR015848	PNPase_PH_RNA-bd_bac/org-type	290	370
IPR004088	KH_dom_type_1	616	671
IPR003029	S1_domain	678	748
IPR015847	ExoRNase_PH_dom2	195	258

External Links

No external refs found!