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  5. Sacu_v1.1_s0070.g016629

Sacu_v1.1_s0070.g016629


Description : not classified & original description: CDS=385-969


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0070.g016629
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Als_g02159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G080000.1 Ceric.20G080000 not classified & original description: pacid=50567377... 0.03 OrthoFinder output from all 47 species
Dcu_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12268 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g39803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ore_g24280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.03 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000088_P001 Zm00001e000088 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 97.1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 85 188
No external refs found!