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  5. Sacu_v1.1_s0068.g016474

Sacu_v1.1_s0068.g016474


Description : not classified & original description: CDS=581-2413


Gene families : OG0001160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0068.g016474

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z085800.1 Ceric.1Z085800 not classified & original description: pacid=50596869... 0.01 OrthoFinder output from all 47 species
Gb_11312 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g43850.1 LOC_Os02g43850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51670.1 LOC_Os03g51670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g01320.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g14695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g006690.3.1 Solyc07g006690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR007751 DUF676_lipase-like 39 260
No external refs found!