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  5. Sacu_v1.1_s0068.g016428

Sacu_v1.1_s0068.g016428


Description : not classified & original description: CDS=1-2139


Gene families : OG0049136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0068.g016428
Cluster HCCA: Cluster_48


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 486 532
IPR002885 Pentatricopeptide_repeat 181 228
IPR002885 Pentatricopeptide_repeat 588 635
IPR002885 Pentatricopeptide_repeat 282 328
IPR002885 Pentatricopeptide_repeat 384 430
IPR002885 Pentatricopeptide_repeat 81 129
IPR002885 Pentatricopeptide_repeat 56 79
IPR002885 Pentatricopeptide_repeat 662 691
No external refs found!