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  5. Sacu_v1.1_s0067.g016308

Sacu_v1.1_s0067.g016308 (SPL3)


Aliases : SPL3

Description : SBP-type transcription factor & original description: CDS=214-1014


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0067.g016308

Target Alias Description ECC score Gene Family Method Actions
Adi_g112854 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19260 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17545 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13089 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38647 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12656.t1 SPL8, Aspi01Gene12656 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27771.t1 SPL2, Aspi01Gene27771 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47643.t1 SPL3, Aspi01Gene47643 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055767 SPL3 SBP-type transcription factor & original description: CDS=94-1491 0.03 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G007700.1 SPL2, Ceric.29G007700 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04690 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16262 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09158 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003836001 SPL12 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_03922 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21188 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40710 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Msp_g06307 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21455 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04942 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60401 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c3_31380V3.1 Pp3c3_31380 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021215 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0337.g027280 SPL5 SBP-type transcription factor & original description: CDS=1-1188 0.03 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc07g053810.3.1 SPL3, Solyc07g053810 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g55183 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010124_P002 SPL13, SPL13A,... transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 7 35
No external refs found!