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  5. Sacu_v1.1_s0065.g016048

Sacu_v1.1_s0065.g016048


Description : hexose transporter *(SGB/GlcT) & original description: CDS=5877-6962


Gene families : OG0000602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0065.g016048

Target Alias Description ECC score Gene Family Method Actions
Adi_g013139 GLT1, PGLCT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51148 No alias hexose transporter *(SGB/GlcT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g04190.1 GLT1, PGLCT,... glucose transporter. hexose transporter (SGB/GlcT) 0.02 OrthoFinder output from all 47 species
Ore_g36215 No alias hexose transporter *(SGB/GlcT) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00971 GLT1, PGLCT hexose transporter *(SGB/GlcT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06128 No alias hexose transporter *(SGB/GlcT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017006_P003 GLT1, PGLCT,... glucose transporter. hexose transporter (SGB/GlcT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902562 H4 histone acetyltransferase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 143 171
IPR002885 Pentatricopeptide_repeat 621 645
IPR002885 Pentatricopeptide_repeat 217 244
IPR002885 Pentatricopeptide_repeat 445 493
IPR002885 Pentatricopeptide_repeat 546 594
IPR002885 Pentatricopeptide_repeat 345 391
IPR046848 E_motif 667 715
IPR005828 MFS_sugar_transport-like 2 112
IPR005828 MFS_sugar_transport-like 16 284
No external refs found!