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  5. Sacu_v1.1_s0065.g016005

Sacu_v1.1_s0065.g016005


Description : not classified & original description: CDS=1-1116


Gene families : OG0001458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0065.g016005
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00135640 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G22790 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT5G67020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g058910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33019.t2 Aspi01Gene33019 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022129001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_01934 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_09201 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36820.1 LOC_Os08g36820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g28340.1 LOC_Os09g28340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g41405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_6965168g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004741 No alias not classified & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014241 No alias not classified & original description: CDS=1-2076 0.04 OrthoFinder output from all 47 species
Smo429511 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo77776 No alias No description available 0.01 OrthoFinder output from all 47 species
Zm00001e022139_P001 Zm00001e022139 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!