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  5. Sacu_v1.1_s0065.g015985

Sacu_v1.1_s0065.g015985


Description : putative silicon efflux transporter *(LSI2) & original description: CDS=1-1701


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0065.g015985
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g056338 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Adi_g099053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16129 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aev_g26527 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Als_g37588 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aob_g26379 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g18611 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09602.t1 Aspi01Gene09602 putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25042.t1 Aspi01Gene25042 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32908.t1 Aspi01Gene32908 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02613 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Ceric.13G017100.1 Ceric.13G017100 putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g28975 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g28976 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05390.6 LOC_Os03g05390 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39980.1 LOC_Os10g39980 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
Len_g22138 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04846 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
MA_10272693g0010 No alias Silicon efflux transporter LSI3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Mp1g14840.1 No alias putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Ppi_g13706 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g025350.3.1 Solyc03g025350 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g44746 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g47898 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 27 511
No external refs found!