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  5. Ehy_g06811

Ehy_g06811


Description : regulatory factor *(RBP45/47) of mRNA stress granule formation & original description: none


Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06811
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00161920 ATRBP45A,... Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g057443 RBP45B, ATRBP45B regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g079154 ATRBP47B, RBP47B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113480 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g07576 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g26974 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aob_g02116 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26347.t1 Aspi01Gene26347 regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre16.g652900 ATRBP45A, RBP45A Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g21098 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
LOC_Os04g37690.1 ATRBP47C',... mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Len_g22426 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
MA_10433182g0010 ATRBP45C Polyadenylate-binding protein RBP47C OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10433660g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Ore_g34352 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g06468 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g17296 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g18156 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sam_g06637 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Smo80061 ATRBP47C', RBP47C' Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia 0.02 OrthoFinder output from all 47 species
Tin_g11427 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Zm00001e000547_P001 Zm00001e000547 mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Zm00001e009967_P001 ATRBP47C,... mRNA-binding regulatory factor (RBP45/47) 0.02 OrthoFinder output from all 47 species
Zm00001e010479_P003 ATRBP45A,... mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 206 276
IPR000504 RRM_dom 114 181
IPR000504 RRM_dom 319 382
No external refs found!