Ehy_g06810 (LYC)


Aliases : LYC

Description : EC_5.5 intramolecular lyase & original description: none


Gene families : OG0004073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004073_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06810
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.44 LYC Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre08.g358538 LYC Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Dac_g07291 LYC EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21119 LYC EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo266613 LYC Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Solyc04g040190.1.1 LYC, Solyc04g040190 lycopene beta cyclase (LCY-b) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!