1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0063.g015668

Sacu_v1.1_s0063.g015668


Description : E3 ubiquitin ligase *(XBAT3) & original description: CDS=532-1287


Gene families : OG0000851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0063.g015668

Target Alias Description ECC score Gene Family Method Actions
Adi_g039421 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14396 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13210 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04911 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09598 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51936.t1 XBAT31, Aspi01Gene51936 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046525 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=99-1358 0.05 OrthoFinder output from all 47 species
Ceric.07G072800.1 XBAT31, Ceric.07G072800 E3 ubiquitin ligase *(XBAT3) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g12578 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27313 XBAT31 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g74320.1 XBAT31, LOC_Os01g74320 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ore_g08392 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08389 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08640 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06069 XBAT31 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027635_P001 XBAT31, Zm00001e027635 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0032502 developmental process IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 55 141
IPR002110 Ankyrin_rpt 160 233
No external refs found!