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  5. Sacu_v1.1_s0063.g015638

Sacu_v1.1_s0063.g015638 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: CDS=1-2175


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0063.g015638
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.04 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023333 CRR22 not classified & original description: CDS=1-2235 0.05 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Nbi_g21420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 65 87
IPR002885 Pentatricopeptide_repeat 369 394
IPR002885 Pentatricopeptide_repeat 162 189
IPR002885 Pentatricopeptide_repeat 267 289
IPR002885 Pentatricopeptide_repeat 395 441
IPR002885 Pentatricopeptide_repeat 497 544
IPR002885 Pentatricopeptide_repeat 90 138
IPR002885 Pentatricopeptide_repeat 293 340
IPR002885 Pentatricopeptide_repeat 191 238
No external refs found!