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  5. Sacu_v1.1_s0062.g015595

Sacu_v1.1_s0062.g015595


Description : not classified & original description: CDS=1-1779


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015595

Target Alias Description ECC score Gene Family Method Actions
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g17162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.06 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 539 586
IPR001680 WD40_repeat 498 527
IPR001680 WD40_repeat 342 371
No external refs found!