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  5. Sacu_v1.1_s0062.g015577

Sacu_v1.1_s0062.g015577


Description : transcriptional co-regulator *(Oberon) & original description: CDS=348-1157


Gene families : OG0007425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015577

Target Alias Description ECC score Gene Family Method Actions
Adi_g022306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69240 AIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 185 227
IPR032881 Oberon_PHD 642 760
No external refs found!