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  5. Sacu_v1.1_s0062.g015575

Sacu_v1.1_s0062.g015575


Description : not classified & original description: CDS=378-2618


Gene families : OG0000496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0062.g015575
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Gb_37568 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_169091g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g35482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g009970.4.1 Solyc04g009970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011658_P002 Zm00001e011658 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!