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  5. Sacu_v1.1_s0061.g015430

Sacu_v1.1_s0061.g015430


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: CDS=1395-2684


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0061.g015430
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g011688 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g03275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04076 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g48815 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g11274 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.16G058100.1 Ceric.16G058100 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.22G041300.1 SKIP6, Ceric.22G041300 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g15274 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g04015 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g07993 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g03836 No alias substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g05272 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g06916 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 76 113
IPR006652 Kelch_1 168 208
IPR006652 Kelch_1 211 258
No external refs found!