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  5. Sacu_v1.1_s0061.g015395

Sacu_v1.1_s0061.g015395 (DRB3)


Aliases : DRB3

Description : regulatory protein *(DRB2) of miRNA biogenesis pathway & original description: CDS=216-1796


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0061.g015395
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Aev_g00497 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04523 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Cba_g26876 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09247 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33970.1 DRB2, LOC_Os10g33970 Double-stranded RNA-binding protein 6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_15142g0010 DRB2 Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g37490 DRB4 component *(DRB4) of DRB4-DRB7.1 siRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Solyc01g056600.2.1 DRB2, Solyc01g056600 Double-stranded RNA-binding protein 1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Spa_g13176 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 3 68
IPR014720 dsRBD_dom 89 153
No external refs found!