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  5. Sacu_v1.1_s0061.g015303

Sacu_v1.1_s0061.g015303


Description : E3 ubiquitin ligase *(PIRE) & original description: CDS=420-1622


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0061.g015303

Target Alias Description ECC score Gene Family Method Actions
Cba_g22618 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10298 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28117 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00816 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01110 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48676 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!