Sacu_v1.1_s0060.g015268


Description : not classified & original description: CDS=42-668


Gene families : OG0007246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007246_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0060.g015268

Target Alias Description ECC score Gene Family Method Actions
Als_g03533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g08319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038586001 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
Gb_09516 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os10g35810.1 LOC_Os10g35810 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_10429821g0010 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp1g10990.1 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g00295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082890.3.1 Solyc03g082890 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e012591_P001 Zm00001e012591 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 129 164
No external refs found!